For each of the tables, the proportion of enriched profile was first determined. This was done by calculating the proportion of the sequence that was above the threshold defined by the authors. This step provided a score for each sequence. To determine overall score for a set, an average of the above mentioned proportions was calcualted for each set.
As a next step, proportions of disordered proteins is compared for each combination. If the set on the left (cancers) has larger proportion, the colour is green. If the column one (neurodegenerative) is larger, the dot is red. If the proportion is equal (which is highly unlikely in this case), the colour is yellow. This should have the same meaning as the table from multiCM analyser.
| fileA / file B | AD_DOWN | AD_UP | PD_DOWN | PD_UP | SCZ_DOWN | SCZ_UP |
| CRC_DOWN | ||||||
| CRC_UP | ||||||
| LC_DOWN | ||||||
| LC_UP | ||||||
| PC_DOWN | ||||||
| PC_UP |